Independent Open Source/Open Data Developer, Oakland, California

jhpoelen@xs4all.nl

projects / publications

https://globalbioticinteractions.org (GloBI)

Jorrit H. Poelen, James D. Simons and Chris J. Mungall. (2014). Global Biotic Interactions: An open infrastructure to share and analyze species-interaction datasets. Ecological Informatics. doi:10.1016/j.ecoinf.2014.08.005.

open datasets

Aggregate index of linked species interactions records in openly available species interaction datasets (parasites, pathogens, symbionts, vectors, pollinators, predators, etc) - https://globalbioticinteractions.org/data . See also http://opentraits.org/datasets/globi .

existing collaborations / integrations

Helps to continously integrate over 100 openly accessible species interaction datasets, GoMexSI, Encyclopedia of Life, World Register of Marine Species, Fishbase, SealifeBase, NCBI Taxonomy, OBO Relations Ontology, iNaturalist, Arctos.

collaboration statement

Willing to index any openly available species interaction datasets in any format, open to help re-use interaction data in research and education projects, provide advice on pragmatic data integration workflows.

contact info

jhpoelen at xs4all dot nl or Open Traits discussion forum